|
Andrew, S. M., Titus, J. A., & Zumstein, L. (2001). Dialysis and concentration of protein solutions. Current Protocols in Toxicology, 10(1), A-3H. Arezi, B., & Hogrefe, H. (2009). Novel mutations in Moloney Murine Leukemia Virus reverse transcriptase increase thermostability through tighter binding to template-primer. Nucleic acids research, 37(2), 473-481. Baba, M., Kakue, R., Leucht, C., Rasor, P., Walch, H., Ladiges, D., Bell, C., Kojima, K., Takita, T., & Yasukawa, K. (2017). Further increase in thermostability of Moloney murine leukemia virus reverse transcriptase by mutational combination. Protein Engineering, Design and Selection, 30(8), 551-557. Bradford, M. M. (1976). A rapid and sensitive method for the quantitation of microgram quantities of protein utilizing the principle of protein-dye binding. Analytical biochemistry, 72(1-2), 248-254. Choi, J. H., Keum, K. C., & Lee, S. Y. (2006). Production of recombinant proteins by high cell density culture of Escherichia coli. Chemical engineering science, 61(3), 876-885. Chua, L. H., Tan, S. C., & Liew, M. W. (2018). Process intensification of core streptavidin production through high-cell-density cultivation of recombinant E. coli and a temperature-based refolding method. Journal of biotechnology, 276, 34-41. De Vuyst, L., & Vandamme, E. J. (1991). Microbial manipulation of nisin biosynthesis and. Nisin and novel lantibiotics, 397. Finka, A., Mattoo, R. U., & Goloubinoff, P. (2016). Experimental milestones in the discovery of molecular chaperones as polypeptide unfolding enzymes. Annual review of biochemistry, 85, 715-742. Gay, G., Wagner, D. T., Keatinge-Clay, A. T., & Gay, D. C. (2014). Rapid modification of the pET-28 expression vector for ligation independent cloning using homologous recombination in Saccharomyces cerevisiae. Plasmid, 76, 66-71. Glatz, A., Pilbat, A.-M., Németh, G. L., Vince-Kontár, K., Jósvay, K., Hunya, Á., Udvardy, A., Gombos, I., Péter, M., & Balogh, G. (2016). Involvement of small heat shock proteins, trehalose, and lipids in the thermal stress management in Schizosaccharomyces pombe. Cell Stress and Chaperones, 21(2), 327-338. Grunberg-Manago, M. (1999). Messenger RNA stability and its role in control of gene expression in bacteria and phages. Annual review of genetics, 33(1), 193-227. Johnston, W., Cord-Ruwisch, R., & Cooney, M. J. (2002). Industrial control of recombinant E. coli fed-batch culture: new perspectives on traditional controlled variables. Bioprocess and Biosystems Engineering, 25(2), 111-120. Kim, H.-K., Rasnik, I., Liu, J., Ha, T., & Lu, Y. (2007). Dissecting metal ion–dependent folding and catalysis of a single DNAzyme. Nature chemical biology, 3(12), 763-768. Kim, Y. E., Hipp, M. S., Bracher, A., Hayer-Hartl, M., & Ulrich Hartl, F. (2013). Molecular chaperone functions in protein folding and proteostasis. Annual review of biochemistry, 82, 323-355. Kotewicz, M. L., D'Alessio, J. M., Driftmier, K. M., Blodgett, K. P., & Gerard, G. F. (1985). Cloning and overexpression of Moloney murine leukemia virus reverse transcriptase in Escherichia coli. Gene, 35(3), 249-258. Lin, L., Wan, F., & Hu, J. (2008). Functional and structural dynamics of hepadnavirus reverse transcriptase during protein-primed initiation of reverse transcription: effects of metal ions. Journal of virology, 82(12), 5703-5714. Lin, T., Quinn, T., Walsh, M., Grandgenett, D., & Lee, J. (1991). Avian myeloblastosis virus reverse transcriptase. Effect of glycerol on its hydrodynamic properties. Journal of Biological Chemistry, 266(3), 1635-1640. Lopez, P. J., Marchand, I., Joyce, S. A., & Dreyfus, M. (1999). The C‐terminal half of RNase E, which organizes the Escherichia coli degradosome, participates in mRNA degradation but not rRNA processing in vivo. Molecular microbiology, 33(1), 188-199. Mamat, U., Wilke, K., Bramhill, D., Schromm, A. B., Lindner, B., Kohl, T. A., Corchero, J. L., Villaverde, A., Schaffer, L., & Head, S. R. (2015). Detoxifying Escherichia coli for endotoxin-free production of recombinant proteins. Microbial cell factories, 14(1), 1-15. Mamat, U., Woodard, R. W., Wilke, K., Souvignier, C., Mead, D., Steinmetz, E., Terry, K., Kovacich, C., Zegers, A., & Knox, C. (2013). Endotoxin-free protein production—ClearColi™ technology. Nature Methods, 10(9), 916-916. Matthey, B., Engert, A., Klimka, A., Diehl, V., & Barth, S. (1999). A new series of pET-derived vectors for high efficiency expression of Pseudomonas exotoxin-based fusion proteins. Gene, 229(1-2), 145-153. Mitraki, A., & King, J. (1989). Protein folding intermediates and inclusion body formation. Bio/technology, 7(7), 690-697. Nolan, T., Hands, R. E., & Bustin, S. A. (2006). Quantification of mRNA using real-time RT-PCR. Nature protocols, 1(3), 1559-1582. Ohtake, S., & Wang, Y. J. (2011). Trehalose: current use and future applications. Journal of pharmaceutical sciences, 100(6), 2020-2053. Page-Sharp, M., Behm, C. A., & Smith, G. D. (1999). Involvement of the compatible solutes trehalose and sucrose in the response to salt stress of a cyanobacterial Scytonema species isolated from desert soils. Biochimica et Biophysica Acta (BBA)-General Subjects, 1472(3), 519-528. Petsch, D., & Anspach, F. B. (2000). Endotoxin removal from protein solutions. Journal of biotechnology, 76(2-3), 97-119. Pinsach, J., de Mas, C., & López-Santín, J. (2008). Induction strategies in fed-batch cultures for recombinant protein production in Escherichia coli: Application to rhamnulose 1-phosphate aldolase. Biochemical Engineering Journal, 41(2), 181-187. Potts, M., Slaughter, S. M., Hunneke, F.-U., Garst, J. F., & Helm, R. F. (2005). Desiccation tolerance of prokaryotes: application of principles to human cells. Integrative and Comparative Biology, 45(5), 800-809. Restaino, O. F., Cimini, D., De Rosa, M., Catapano, A., & Schiraldi, C. (2011). High cell density cultivation of Escherichia coli K4 in a microfiltration bioreactor: a step towards improvement of chondroitin precursor production. Microbial cell factories, 10(1), 1-10. Ringe, D., & Petsko, G. A. (2009). Q&A: What are pharmacological chaperones and why are they interesting?. Journal of biology, 8(9), 80. Rodgers, D., Gamblin, S., Harris, B., Ray, S., Culp, J., Hellmig, B., Woolf, D., Debouck, C., & Harrison, S. (1995). The structure of unliganded reverse transcriptase from the human immunodeficiency virus type 1. Proceedings of the National Academy of Sciences, 92(4), 1222-1226. Sabbioni, E., Blanch, N., Baricevic, K., & Serra, M.-á. (1999). Effects of trace metal compounds on HIV-1 reverse transcriptase. Biological trace element research, 68(2), 107-119. Shilling, P. J., Mirzadeh, K., Cumming, A. J., Widesheim, M., Köck, Z., & Daley, D. O. (2020). Improved designs for pET expression plasmids increase protein production yield in Escherichia coli. Communications biology, 3(1), 1-8. Šiurkus, J., Panula-Perälä, J., Horn, U., Kraft, M., Rimšeliene, R., & Neubauer, P. (2010). Novel approach of high cell density recombinant bioprocess development: Optimisation and scale-up from microlitre to pilot scales while maintaining the fed-batch cultivation mode of E. coli cultures. Microbial cell factories, 9(1), 1-17. Taherimehr, Z., Zaboli, M., & Torkzadeh-Mahani, M. (2020). New insight into the molecular mechanism of the trehalose effect on urate oxidase stability. Journal of Biomolecular Structure and Dynamics, 1-11. Tejayadi, S., & Cheryan, M. (1995). Lactic acid from cheese whey permeate. Productivity and economics of a continuous membrane bioreactor. Applied microbiology and biotechnology, 43(2), 242-248. Tereshina, V. (2005). Thermotolerance in fungi: the role of heat shock proteins and trehalose. Microbiology, 74(3), 247-257. Thiry, M., & Cingolani, D. (2002). Optimizing scale-up fermentation processes. TRENDS in Biotechnology, 20(3), 103-105. Thomas, J. G., Ayling, A., & Baneyx, F. (1997). Molecular chaperones, folding catalysts, and the recovery of active recombinant proteins from E. coli. Applied biochemistry and biotechnology, 66(3), 197-238. Toyoda, T., Wang, Y., Wen, Y., & Tanaka, Y. (2020). Fluorescence-based biochemical analysis of human hepatitis B virus reverse transcriptase activity. Analytical biochemistry, 597, 113642. Valasatava, Y., Rosato, A., Furnham, N., Thornton, J. M., & Andreini, C. (2018). To what extent do structural changes in catalytic metal sites affect enzyme function? Journal of inorganic biochemistry, 179, 40-53. Valverde-Garduño, V., Gariglio, P., & Gutiérrez, L. (1998). Functional analysis of HIV-1 reverse transcriptase motif C: site-directed mutagenesis and metal cation interaction. Journal of molecular evolution, 47(1), 73-80. Walter, S., & Buchner, J. (2002). Molecular chaperones—cellular machines for protein folding. Angewandte Chemie International Edition, 41(7), 1098-1113. Wang, H., Wang, F., Wang, W., Yao, X., Wei, D., Cheng, H., & Deng, Z. (2014). Improving the expression of recombinant proteins in E. coli BL21 (DE3) under acetate stress: an alkaline pH shift approach. PloS one, 9(11), 112777. Waterman, K. C. (2009). Understanding and predicting pharmaceutical product shelf-life. In Handbook of stability testing in pharmaceutical development (pp. 115-135). Springer, New York, NY. Xin, F., Dong, W., Dai, Z., Jiang, Y., Yan, W., Lv, Z., Fang, Y., & Jiang, M. (2019). Biosynthetic Technology and Bioprocess Engineering. In Current Developments in Biotechnology and Bioengineering (pp. 207-232). Elsevier. Yasukawa, K., Mizuno, M., Konishi, A., & Inouye, K. (2010). Increase in thermal stability of Moloney murine leukaemia virus reverse transcriptase by site-directed mutagenesis. Journal of biotechnology, 150(3), 299-306. Zhang, J., Suflita, M., Fiaschetti, C., Li, G., Li, L., Zhang, F., Dordick, J., & Linhardt, R. (2015). High cell density cultivation of a recombinant Escherichia coli strain expressing a 6‐O‐sulfotransferase for the production of bioengineered heparin. Journal of applied microbiology, 118(1), 92-98. Zhou, Y., Ma, X., Hou, Z., Xue, X., Meng, J., Li, M., Jia, M., & Luo, X. (2012). High cell density cultivation of recombinant Escherichia coli for prodrug of recombinant human GLPs production. Protein expression and purification, 85(1), 38-43. Zucha, D., Androvic, P., Kubista, M., & Valihrach, L. (2020). Performance comparison of reverse transcriptases for single-cell studies. Clinical chemistry, 66(1), 217-228.
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