|
吳泰徵,2017,Actinotalea fermentans ATCC 43279 來源重組 L- 核糖異構酶之特性與固定化並以蛋白質工程改變其熱穩定性,國立臺灣海洋大學食品科學系碩士學位論文,基隆。 馬莉婷,2020,臺灣杉萜類合成酶的演化與生化功能探討,臺灣大學森林環境暨資源學研究所學位論文,台北。 顏艾,2021,Deinococcus indicus DSM 15307 來源重組澱粉蔗糖酶之特性探討並以蛋白質工程改變其熱穩定性,國立臺灣海洋大學食品科學系碩士學位論文,基隆。 Agarwal, N., Narnoliya, L. K., & Singh, S. P. (2019). Characterization of a novel amylosucrase gene from the metagenome of a thermal aquatic habitat, and its use in turanose production from sucrose biomass. Enzyme and microbial technology, 131, 109372. Bae, J., Jun S. J., Chang P. S., & Yoo S. H. (2022). A unique biochemical reaction pathway towards trehalulose synthesis by an amylosucrase isolated form Deinococcus deserti. New Biotechnology, 70, 1-8. Beerens, K., Desmet T., & Soetaert W. (2012). Enzymes for the biocatalytic production of rare sugars. Journal of Industrial Microbiology & Biotechnology, 39(6), 823-834. Borders Jr, C., Broadwater, J. A., Bekeny, P. A., Salmon, J. E., Lee, A. S., Eldridge, A. M., & Pett, V. B. (1994). A structural role for arginine in proteins: multiple hydrogen bonds to backbone carbonyl oxygens. Protein Science, 3(4), 541-548. But, S. Y., Khmelenina, V. N., Reshetnikov, A. S., Mustakhimov, I. I., Kalyuzhnaya, M. G., & Trotsenko, Y. A. (2015). Sucrose metabolism in halotolerant methanotroph Methylomicrobium alcaliphilum 20Z. Archives of Microbiology, 197(3), 471-480. Cambon E., Barbe S., Pizzut-Serin S., Remaud-Simeon M., & André I. (2014). Essential role of amino acid position 226 in oligosaccharide elongation by amylosucrase from I. Biotechnology and Bioengineering, 111, 1719-1728. Choi S. W., Lee J. A., & Yoo, S. H. (2019). Sucrose-based biosynthetic process for chain-length-defined α-glucan and functional sweetener by Bifidobacterium amylosucrase. Carbohydrate Polymers, 205, 581-588. Chung, J.Y., Kim Y. S., Kim Y., & Yoo S. H. (2017). Regulation of inflammation by sucrose isomer, turanose, in Raw 264.7 cells. Journal of Cancer Prevention, 22(3), 195-201. Craig, D. B., & Dombkowski, A. A. (2013). Disulfide by Design 2.0: a web-based tool for disulfide engineering in proteins. BMC bioinformatics, 14(1), 1-7. Dai, Y., Zhang, J., Zhang, T., Chen, J., Hassanin, H. A., & Jiang, B. (2020). Characteristics of a fructose 6-phosphate 4-epimerase from Caldilinea aerophila DSM 14535 and its application for biosynthesis of tagatose. Enzyme and Microbial Technology, 139, 109594. Das, S., Paul, S., Bag, S. K., & Dutta, C. (2006). Analysis of Nanoarchaeum equitans genome and proteome composition: indications for hyperthermophilic and parasitic adaptation. BMC genomics, 7(1), 1-16. Diaz, J. E., Lin, C. S., Kunishiro, K., Feld, B. K., Avrantinis, S. K., Bronson, J., Greaves, J., Saven J. G., & Weiss G. A. (2011). Computational design and selections for an engineered, thermostable terpene synthase. Protein Science, 2011, 20(9), 1597-1606. Dror, A., Shemesh, E., Dayan, N., & Fishman, A. (2014). Protein engineering by random mutagenesis and structure-guided consensus of Geobacillus stearothermophilus lipase T6 for enhanced stability in methanol. Applied and environmental microbiology, 80(4), 1515-1527. Emond, S., Mondeil, S., Jaziri, K., André, I., Monsan, P., Remaud-Siméon, M., & Potocki-Véronèse, G. (2008). Cloning, purification and characterization of a thermostable amylosucrase from Deinococcus geothermalis. FEMS microbiology letters, 285(1), 25-32. Guérin, F., Barbe, S., Pizzut-Serin, S., Potocki-Véronèse, G., Guieysse, D., Guillet, V., ... & Tranier, S. (2012). Structural investigation of the thermostability and product specificity of amylosucrase from the bacterium Deinococcus geothermalis. Journal of Biological Chemistry, 287(9), 6642-6654. Grodberg, J., & Dunn, J. J. (1988). ompT encodes the Escherichia coli outer membrane protease that cleaves T7 RNA polymerase during purification. Journal of Bacteriology. 170, 1245–1253. Ha, S. J., Seo, D. H., Jung, J. H., Cha, J., Kim, T. J., Kim, Y. W., & Park, C. S. (2009). Molecular cloning and functional expression of a new amylosucrase from Alteromonas macleodii. Bioscience, biotechnology, and biochemistry, 73(7), 1505-1512. Hodoniczky, J., Morris C.A., & Rae A.L. Oral and intestinal digestion of oligosaccharides as potential sweeteners: A systematic evaluation. Food Chemistry, 2012. 132(4),1951-1958. Jeong, J. W., Seo, D. H., Jung, J. H., Park, J. H., Baek, N. I., Kim, M. J., & Park, C. S. Biosynthesis of glucosyl glycerol, a compatible solute, using intermolecular transglycosylation activity of amylosucrase from Methylobacillus flagellatus KT. Applied Biochemistry and Biotechnology, 2014, 173, 904-917. Jo, B. H., Park, T. Y., Park, H. J., Yeon, Y. J., Yoo, Y. J., & Cha, H. J. (2016). Engineering de novo disulfide bond in bacterial α-type carbonic anhydrase for thermostable carbon sequestration. Scientific reports, 6(1), 1-9. Kim, K. T., Rha, C. S., Jung, Y. S., Kim, Y.-J., Jung, D.-H., Seo, D.-H., & Park, C.-S. (2019). Comparative study on amylosucrases derived from Deinococcus species and catalytic characterization and use of amylosucrase derived from Deinococcus wulumuqiensis. Amylase, 3(1), 19-31. Leite, J. D. C., Trugo, L. C., Costa, L. S. M., Quinteiro, L. M. C., Barth, O. M., Dutra, V. M. L., & De Maria, C. A. B. (2000). Determination of oligosaccharides in Brazilian honeys of different botanical origin. Food Chemistry, 70(1), 93-98. Li, L., Liao, H., Yang, Y., Gong, J., Liu, J., Jiang, Z., Zhu, Y., Xiao, A., & Ni, H. (2018). Improving the thermostability by introduction of arginines on the surface of α-L-rhamnosidase (r-Rha1) from Aspergillus niger. International journal of biological macromolecules, 112, 14-21. MANUAL, Instruction. BL21-CodonPlus® Competent Cells. 2018 Mazzoni, V., Bradesi, P., Tomi F., & Casanova J. Direct qualitative and quantitative analysis of carbohydrate mixtures using 13C NMR spectroscopy: application to honey. Magnetic Resonance in Chemistry, 1997. 35(13). S81-S90. Niesen, F. H., Berglund, H., & Vedadi, M. (2007). The use of differential scanning fluorimetry to detect ligand interactions that promote protein stability. Nature protocols, 2(9), 2212-2221. Ordu, E. B., Sessions, R. B., Clarke, A. R., & Karagüler, N. G. (2013). Effect of surface electrostatic interactions on the stability and folding of formate dehydrogenase from Candida methylica. Journal of Molecular Catalysis B: Enzymatic, 95, 23-28. Park, M. O., Chandrasekaran, M., & Yoo, S. H. (2018). Expression, purification, and characterization of a novel amylosucrase from Neisseria subflava. International Journal of Biological Macromolecules, 109, 160-166. Park, M. O., Lee, B. H., Lim, E., Lim, J. Y., Kim, Y., Park, C. S., Lee, H. G., Kang, H. K., & Yoo, S. H. (2016). Enzymatic process for high-yield turanose production and its potential property as an adipogenesis regulator. Journal of Agricultural and Food Chemistry, 64, 4758-4764. Perez-Cenci, M., & Salerno, G. L. (2014). Functional characterization of Synechococcus amylosucrase and fructokinase encoding genes discovers two novel actors on the stage of cyanobacterial sucrose metabolism. Plant Science, 224, 95-102. Pizzut-Serin, S., Potocki-Véronèse, G., van der Veen, B. A., Albenne, C., Monsan, P., & Remaud-Simeon, M. (2005). Characterisation of a novel amylosucrase from Deinococcus radiodurans. FEBS Letters, 579(6), 1405-1410. Rosano, G. L., and Ceccarelli, E. A. (2014). Recombinant protein expression in Escherichia coli: advances and challenges. Frontiers in microbiology, 5, 172. Rubinstein, R., & Fiser, A. (2008). Predicting disulfide bond connectivity in proteins by correlated mutations analysis. Bioinformatics, 24(4), 498-504. Seo, D.H., Jung, J. H., Choi, H. C., Cho, H. K., Kim, H. H., Ha, S. J., Yoo, S. H., Cha, J., & Park, C. S. (2012). Functional expression of amylosucrase, a glucan-synthesizing enzyme, from Arthrobacter chlorophenolicus A6. Journal of Microbiology and Biotechnology, 22(9), 1253-1257. Shibuya, T., Mandai, T., Kubota, M., Fukuda, S., Kurimoto, M., & Tsujisaka, Y. (2004). Production of turanose by cyclomaltodextrin glucanotransferase from Bacillus stearothermophilus. Journal of Applied Glycoscience, 51(3), 223-227. Skov, L.K., Osman, M., Henriksen, A., De Montalk, G. P., Remaud-Simeon, M., Sarcabal, P., Willemot, R. M., Mosan, P., & Gajhede, M. (2001). Amylosucrase, a glucan-synthesizing enzyme from the alpha-amylase family. Journal of Biological Chemistry, 276(27), 25273-25278. Skov, L. K., Pizzut-Serin, S., Remaud-Simeon, M., Ernst, H. A., Gajhede, M., & Mirza, O. (2013). The structure of amylosucrase from Deinococcus radiodurans has an unusual open active-site topology. Acta Crystallographica Section F: Structural Biology and Crystallization Communications, 69(9), 973-978. Souvignier C., & Porter M. (2017). Endotoxin-Free ClearColi® BL21 (DE3) for protein expression: Reduced risk of masked endotoxin. Su, L., Zhao, Y., Wu, D. & Wu, J., (2020). Heterogeneous expression, molecular modification of amylosucrase from Neisseria polysaccharea, and its application in the preparation of turanose. Food Chemistry, 314, 126212. Suresh, K., Reddy, G., Sengupta, S., & Shivaji, S. (2004). Deinococcus indicus sp. nov., an arsenic-resistant bacterium from an aquifer in West Bengal, India. International Journal of Systematic and Evolutionary Microbiology, 54(2), 457- 461. Sun, Z., Liu, Q., Qu, G., Feng, Y., & Reetz, M. T. (2019). Utility of B-factors in protein science: Interpreting rigidity, flexibility, and internal motion and engineering thermostability. Chemical reviews, 119(3), 1626-1665. Waterhouse, A., Bertoni, M., Bienert, S., Studer, G., Tauriello, G., Gumienny, R., Heer, F. T., de Beer, T. A. P., Rempfer, C., Bordoli, L., Leopore, R. & Schwede, T. (2018). SWISS-MODEL: Homology modelling of protein structures and complexes. Nucleic acids research, 46(W1), W296-W303. Wang, R., Bae, J. S., Kim, J. H., Kim, B. S., Yoon, S. H., Park, C. S., & Yoo, S. H. (2012). Development of an efficient bioprocess for turanose production by sucrose isomerisation reaction of amylosucrase. Food Chemistry, 132(2), 773-779. Weston, R.J. and L.K. Brocklebank, The oligosaccharide composition of some New Zealand honeys. Food Chemistry, 1999. 64(1), 33-37. Xu, Z., Cen, Y. K., Zou, S. P., Xue, Y. P., & Zheng, Y. G. (2020). Recent advances in the improvement of enzyme thermostability by structure modification. Critical reviews in biotechnology, 40(1), 83-98. Yu, H., Zhao, Y., Guo, C., Gan, Y., & Huang, H. (2015). The role of proline substitutions within flexible regions on thermostability of luciferase. Biochimica et Biophysica Acta (BBA)-Proteins and Proteomics, 1854(1), 65-72. Yu, S., Wang, Y., Tian, Y., Xu, W., Bai, Y., Zhang, T., & Mu, W. (2018). Highly efficient biosynthesis of α-arbutin from hydroquinone by an amylosucrase from Cellulomonas carboniz. Process Biochemistry, 68, 93-99. Zhang, H., Zhou, X., He, J., Wang, T., Luo, X., Wang, L., & Chen, Z. (2017). Impact of amylosucrase modification on the structural and physicochemical properties of native and acid-thinned waxy corn starch. Food chemistry, 220, 413-419.
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